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GO::Model::Term 0.04 by GO::Model::Term Team

GO::Model::Term is a term or concept in an ontology.


# From a file
use GO::Parser;
my $parser = new GO::Parser({handler=>'obj'}); # create parser object
$parser->parse("gene_ontology.obo"); # parse file -> objects
my $graph = $parser->handler->graph; # get L object

Term::GDBUI 0.84 by Scott Bronson

Term::GDBUI is a fully-featured shell-like command line environment.


use Term::GDBUI;
my $term = new Term::GDBUI(commands => get_commands());
# (see below for the code to get_commands)

Term::GDBUI uses the history and autocompletion features of Term::ReadLine… 

Yahoo::Search 1.7.10 by Jeffrey Friedl

Yahoo::Search is a Perl interface to the Yahoo! Search public API.

The following search spaces are supported:

Common web search for documents (html, pdf, doc, ...), including Y!Q contextual search.

Image search (jpeg, png, gif, ...)

Video file search (avi, mpeg, realme… 

Apropos2 1.0.1 by Tony Nelson

Apropos2 is a replacement for the GNU apropos command that winnows down its responses when given more than one search term.

The apropos in man repeatedly prints everything that matches each search term. (The apparent similarity between apropos and whatis led to them being the same script.) Apropo… 

Term::ReadLine::Gnu 1.16 by Hiroo Hayashi

Term::ReadLine::Gnu is a Perl extension for the GNU Readline/History Library.


use Term::ReadLine;
$term = new Term::ReadLine 'ProgramName';
while ( defined ($_ = $term->readline('prompt>')) ) {

This is an implementation of Term::ReadLine using the GNU Readline… 

Term::ShellUI 0.85 by Scott Bronson

Term::ShellUI is a fully-featured shell-like command line environment.


use Term::ShellUI;
my $term = new Term::ShellUI(
commands => {
"cd" => {
desc => "Change to directory DIR",
maxargs => 1, args => sub { shift->comple… 

Term::Prompt 1.03 by Matthew O. Persico

Term::Prompt is a Perl extension for prompting a user for information.


use Term::Prompt;
$value = &prompt(...);

use Term::Prompt qw(termwrap);
print &termwrap(...);

$Term::Prompt::MULTILINE_INDENT = '';


You must have Text::Wrap and Term:… 

Search::QueryParser 0.91 by Laurent Dami

Search::QueryParser parses a query string into a data structure suitable for external search engines.


my $qp = new Search::QueryParser;
my $s = '+mandatoryWord -excludedWord +field:word "exact phrase"';
my $query = $qp->parse($s) or die "Error in query : " . $qp->err;

Bio::Ontology::GOterm 1.4 by Christian M. Zmasek

Bio::Ontology::GOterm is a representation of GO terms.


$term = Bio::Ontology::GOterm->new
( -go_id => "GO:0016847",
-name => "1-aminocyclopropane-1-carboxylate synthase",
-definition => "Catalysis of ...",
-is_obsolete => 0,

Term::Shell 0.01 by Neil Watkiss

Term::Shell is a simple command-line shell framework.


package MyShell;
use base qw(Term::Shell);

sub run_command1 { print "command 1!n"; }
sub smry_command1 { "what does command1 do?" }
sub help_command1 {

Term::Shell lets you write simp… 

Term::Gnuplot 0.90380905 by Term::Gnuplot Team

Term::Gnuplot is a Perl module for lowlevel graphics using gnuplot drawing routines.


use Term::Gnuplot ':ALL';
change_term('dumb') or die "Cannot set terminal.n";
term_init(); # init()
term_start_plot(); # graphic… 

Add Mol Bio Search Engines To Your Konq 0.1 by Reza Salari

Add Mol Bio Search Engines To Your Konq script adds "PDB search" and "NCBI Entrez cross database search" engines to your Konqueror. Now you can search these databases right from your konq. The procedure of adding these search engines to Konq is explained in download file.

Now for example if you… 

Term::VT102 0.82 by Andrew Wood

Term::VT102 is a class to emulate a DEC VT102 terminal.


use Term::VT102;

my $vt = Term::VT102->new ('cols' => 80, 'rows' => 24);
while () { $vt->process ($_); }

The VT102 class provides emulation of most of the functions of a DEC VT102 terminal. Once initialised, data pas… 

Term::ANSIMenu 0.02 by J.A. de Vries

Term::ANSIMenu is an infrastructure for creating menus in ANSI capable terminals.


use Term::ANSIMenu;
my $menu = Term::ANSIMenu->new(
width => 40,
help => [['', &standard_help],

Search::ContextGraph 0.15 by Maciej Ceglowski

Search::ContextGraph is a Perl module for spreading activation search engine.


use Search::ContextGraph;

my $cg = Search::ContextGraph->new();

# first you add some documents, perhaps all at once...

my %docs = (
'first' => [ 'elephant', 'snake' ],

Term::TUI 1.20 by Sullivan Beck

Term::TUI is a simple tool for building text-based user interfaces.


If TUI_Run is the only routine being used:
use Term::TUI;

If other TUI subroutines are used:
use Term::TUI qw(:all);

Pfm 1.92.2 by Ren? Uittenbogaard

Pfm is a terminal-based file manager written in Perl, based on PFM.COM for MS-DOS.

It makes use of the module Term::ScreenColor, which was based on Term::Screen, , in turn derived from Term::Cap. Term::ScreenColor is also available on CPAN.

Furthermore, it uses the Term::ReadLi… 

Term::ANSIScreen 1.42 by Autrijus Tang

Term::ANSIScreen is a Perl module for terminal control using ANSI escape sequences.


# qw/:color/ is exported by default, i.e. color() & colored()

use Term::ANSIScreen qw/:color :cursor :screen :keyboard/;

print setmode(1), setkey('a','b');
print "40x25 mode now,… 

granule 1.2.3 by Vladislav Grinchenko

granule is a flashcard program that implements Leitner (by the German psychologist Sebastian Leitner in the 1970s) cardfile methodology for learning new words. It features both short-term and long-term memory training capabilities with scheduling.

Here are some key features of "granule":

Biblio::Thesaurus 0.27 by Alberto Simoes, Jos? Joao Almeida and Sara Correia

Biblio::Thesaurus is a Perl extension for managing ISO thesaurus.


use Biblio::Thesaurus;

$obj = thesaurusNew();
$obj = thesaurusLoad('iso-file');
$obj = thesaurusRetrieve('storable-file');
$obj = thesaurusMultiLoad('iso-file1','iso-file2',...);




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