pyNetConv 0.12 review

pyNetConv is a Python library created to help the conversion of some network file formats. Since version 0.6, pyNetConv is capable

License: GPL (GNU General Public License) File size: 0K Developer: M?rcio Rosa da Silva

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pyNetConv is a Python library created to help the conversion of some network file formats.

Since version 0.6, pyNetConv is capable to read/write (and convert from/to) the following file formats:

Pajek network files (.net)
Pajek cluster files (.clu)
Cytoscape network files (.sif)
Cytoscape node attributes files
GML files

And from version 0.8 it is able to import tab-separated values exported by Affymetrix Micro Array Suite 5.0 (MAS5) and export this data as Cytoscape node attributes or expression data (.pval file).

pyNetConv is a library to create a software that is able to read/write networks in the formats supported by pyNetConv. If all you want is convert the files without the need create a program, then the Graphical user interface is for you. See the screenshots session to see how the GUI looks like.

What's New in This Release:
Support for isolated (not connected) nodes in SIF format was added.
The SIF, NET, and GML formats now support direction and isolated nodes.
A NX2netconv() method was added (complementary to netconv2NX()) along with a new filter option in importSIF().
It is now possible to import only selected interaction types.